IL_9ROR_015

3D structure

PDB id

9ROR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

UGGUCAAUUU*AUUA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ROR|1|A|U|876
9ROR|1|A|G|877
9ROR|1|A|G|878
9ROR|1|A|U|879
9ROR|1|A|C|880
9ROR|1|A|A|881
9ROR|1|A|A|882
9ROR|1|A|U|883
9ROR|1|A|U|884
9ROR|1|A|U|885
*
9ROR|1|A|A|910
9ROR|1|A|U|911
9ROR|1|A|U|912
9ROR|1|A|A|913

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain D

28S ribosomal protein S5, mitochondrial

Chain J

28S ribosomal protein S12, mitochondrial

Chain O

28S ribosomal protein S18b, mitochondrial

Chain a

Putative ribosome-binding factor A, mitochondrial