3D structure

PDB id
9ROR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.64 Å

Loop

Sequence
UAAAACU*ACACAAA
Length
14 nucleotides
Bulged bases
9ROR|1|A|C|1011
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ROR|1|A|U|974
9ROR|1|A|A|975
9ROR|1|A|A|976
9ROR|1|A|A|977
9ROR|1|A|A|978
9ROR|1|A|C|979
9ROR|1|A|U|980
*
9ROR|1|A|A|1008
9ROR|1|A|C|1009
9ROR|1|A|A|1010
9ROR|1|A|C|1011
9ROR|1|A|A|1012
9ROR|1|A|A|1013
9ROR|1|A|A|1014

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain E
28S ribosomal protein S6, mitochondrial
Chain I
28S ribosomal protein S11, mitochondrial
Chain P
28S ribosomal protein S18c, mitochondrial
Chain Q
MRPS21 isoform 1

Coloring options:

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