IL_9ROR_027

3D structure

PDB id

9ROR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GGU*GC

Length

5 nucleotides

Bulged bases

9ROR|1|A|G|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ROR_027 not in the Motif Atlas

Homologous match to IL_6CZR_148

Geometric discrepancy: 0.477

The information below is about IL_6CZR_148

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

9ROR|1|A|G|1178
9ROR|1|A|G|1179
9ROR|1|A|U|1180
*
9ROR|1|A|G|1474
9ROR|1|A|C|1475

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain a

Putative ribosome-binding factor A, mitochondrial