Loop IL_9ROR

3D structure

PDB id: 9ROR (explore in PDB, NAKB, or RNA 3D Hub)
Description: Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å

Loop

Sequence: CUGUUCUGUAAUCGAUAAACCCCGAUCAACCUCAC*GCAAGAAAUG
Length: 45 nucleotides
Bulged bases: 9ROR|1|A|U|1229, 9ROR|1|A|C|1230, 9ROR|1|A|A|1231, 9ROR|1|A|A|1232
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

9ROR|1|A|C|1204
9ROR|1|A|U|1205
9ROR|1|A|G|1206
9ROR|1|A|U|1207
9ROR|1|A|U|1208
9ROR|1|A|C|1209
9ROR|1|A|U|1210
9ROR|1|A|G|1211
9ROR|1|A|U|1212
9ROR|1|A|A|1213
9ROR|1|A|A|1214
9ROR|1|A|U|1215
9ROR|1|A|C|1216
9ROR|1|A|G|1217
9ROR|1|A|A|1218
9ROR|1|A|U|1219
9ROR|1|A|A|1220
9ROR|1|A|A|1221
9ROR|1|A|A|1222
9ROR|1|A|C|1223
9ROR|1|A|C|1224
9ROR|1|A|C|1225
9ROR|1|A|C|1226
9ROR|1|A|G|1227
9ROR|1|A|A|1228
9ROR|1|A|U|1229
9ROR|1|A|C|1230
9ROR|1|A|A|1231
9ROR|1|A|A|1232
9ROR|1|A|C|1233
9ROR|1|A|C|1234
9ROR|1|A|U|1235
9ROR|1|A|C|1236
9ROR|1|A|A|1237
9ROR|1|A|C|1238
*
9ROR|1|A|G|1351
9ROR|1|A|C|1352
9ROR|1|A|A|1353
9ROR|1|A|A|1354
9ROR|1|A|G|1355
9ROR|1|A|A|1356
9ROR|1|A|A|1357
9ROR|1|A|A|1358
9ROR|1|A|U|1359
9ROR|1|A|G|1360

Current chains

Chain A: 12S mitochondrial rRNA

Nearby chains

Chain G: 28S ribosomal protein S9, mitochondrial
Chain H: 28S ribosomal protein S10, mitochondrial
Chain K: 28S ribosomal protein S14, mitochondrial
Chain a: Putative ribosome-binding factor A, mitochondrial

IL_9ROR_029