3D structure

PDB id
9ROR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.64 Å

Loop

Sequence
CACCC*GACAAG
Length
11 nucleotides
Bulged bases
9ROR|1|A|A|1492
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ROR|1|A|C|1491
9ROR|1|A|A|1492
9ROR|1|A|C|1493
9ROR|1|A|C|1494
9ROR|1|A|C|1495
*
9ROR|1|A|G|1554
9ROR|1|A|A|1555
9ROR|1|A|C|1556
9ROR|1|A|A|1557
9ROR|1|A|A|1558
9ROR|1|A|G|1559

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 3
Aurora kinase A-interacting protein
Chain J
28S ribosomal protein S12, mitochondrial
Chain b
12S rRNA N4-methylcytidine (m4C) methyltransferase

Coloring options:

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