IL_9ROT_028
3D structure
- PDB id
- 9ROT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15, RBFA, and mtIF2 (State M2.1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GGUGCUUCAUAUCCC*GGGCCCUGAAGCGC
- Length
- 29 nucleotides
- Bulged bases
- 9ROT|1|A|A|1188
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9ROT|1|A|G|1178
9ROT|1|A|G|1179
9ROT|1|A|U|1180
9ROT|1|A|G|1181
9ROT|1|A|C|1182
9ROT|1|A|U|1183
9ROT|1|A|U|1184
9ROT|1|A|C|1185
9ROT|1|A|A|1186
9ROT|1|A|U|1187
9ROT|1|A|A|1188
9ROT|1|A|U|1189
9ROT|1|A|C|1190
9ROT|1|A|C|1191
9ROT|1|A|C|1192
*
9ROT|1|A|G|1462
9ROT|1|A|G|1463
9ROT|1|A|G|1464
9ROT|1|A|C|1465
9ROT|1|A|C|1466
9ROT|1|A|C|1467
9ROT|1|A|U|1468
9ROT|1|A|G|1469
9ROT|1|A|A|1470
9ROT|1|A|A|1471
9ROT|1|A|G|1472
9ROT|1|A|C|1473
9ROT|1|A|G|1474
9ROT|1|A|C|1475
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
- Chain a
- Putative ribosome-binding factor A, mitochondrial
Coloring options: