IL_9ROT_037

3D structure

PDB id

9ROT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15, RBFA, and mtIF2 (State M2.1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UCAAGUA*UAUAGA

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ROT|1|A|U|1499
9ROT|1|A|C|1500
9ROT|1|A|A|1501
9ROT|1|A|A|1502
9ROT|1|A|G|1503
9ROT|1|A|U|1504
9ROT|1|A|A|1505
*
9ROT|1|A|U|1545
9ROT|1|A|A|1546
9ROT|1|A|U|1547
9ROT|1|A|A|1548
9ROT|1|A|G|1549
9ROT|1|A|A|1550

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 3

Aurora kinase A-interacting protein

Chain 7

Translation initiation factor IF-2, mitochondrial