3D structure

PDB id
9ROV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
AACACUACG*UAAAACU
Length
16 nucleotides
Bulged bases
9ROV|1|A|C|1143
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ROV|1|A|A|1139
9ROV|1|A|A|1140
9ROV|1|A|C|1141
9ROV|1|A|A|1142
9ROV|1|A|C|1143
9ROV|1|A|U|1144
9ROV|1|A|A|1145
9ROV|1|A|C|1146
9ROV|1|A|G|1147
*
9ROV|1|A|U|1158
9ROV|1|A|A|1159
9ROV|1|A|A|1160
9ROV|1|A|A|1161
9ROV|1|A|A|1162
9ROV|1|A|C|1163
9ROV|1|A|U|1164

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 3
Aurora kinase A-interacting protein
Chain J
28S ribosomal protein S12, mitochondrial
Chain L
28S ribosomal protein S15, mitochondrial

Coloring options:

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