IL_9ROV_028

3D structure

PDB id

9ROV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCU*AG

Length

5 nucleotides

Bulged bases

9ROV|1|A|C|1254

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ROV_028 not in the Motif Atlas

Homologous match to IL_6CZR_152

Geometric discrepancy: 0.2432

The information below is about IL_6CZR_152

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ROV|1|A|C|1253
9ROV|1|A|C|1254
9ROV|1|A|U|1255
*
9ROV|1|A|A|1338
9ROV|1|A|G|1339

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain D

28S ribosomal protein S5, mitochondrial

Chain K

28S ribosomal protein S14, mitochondrial

Chain Z

28S ribosomal protein S33, mitochondrial