3D structure

PDB id
9ROV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Inward conformation) (State M2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CC*GCUACAAAG
Length
11 nucleotides
Bulged bases
9ROV|1|A|C|1290, 9ROV|1|A|C|1293, 9ROV|1|A|A|1296
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ROV|1|A|C|1278
9ROV|1|A|C|1279
*
9ROV|1|A|G|1289
9ROV|1|A|C|1290
9ROV|1|A|U|1291
9ROV|1|A|A|1292
9ROV|1|A|C|1293
9ROV|1|A|A|1294
9ROV|1|A|A|1295
9ROV|1|A|A|1296
9ROV|1|A|G|1297

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain B
28S ribosomal protein S2, mitochondrial
Chain D
28S ribosomal protein S5, mitochondrial
Chain G
28S ribosomal protein S9, mitochondrial
Chain Q
Small ribosomal subunit protein bS21m
Chain S
28S ribosomal protein S23, mitochondrial

Coloring options:

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