Loop IL_9RPF

3D structure

PDB id: 9RPF (explore in PDB, NAKB, or RNA 3D Hub)
Description: Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and mS37 (State M4)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å

Loop

Sequence: AUCACCCCCUCCCCAAU*AACAUAU
Length: 24 nucleotides
Bulged bases: 9RPF|1|A|C|954, 9RPF|1|A|U|961, 9RPF|1|A|A|966, 9RPF|1|A|A|1041
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

9RPF|1|A|A|952
9RPF|1|A|U|953
9RPF|1|A|C|954
9RPF|1|A|A|955
9RPF|1|A|C|956
9RPF|1|A|C|957
9RPF|1|A|C|958
9RPF|1|A|C|959
9RPF|1|A|C|960
9RPF|1|A|U|961
9RPF|1|A|C|962
9RPF|1|A|C|963
9RPF|1|A|C|964
9RPF|1|A|C|965
9RPF|1|A|A|966
9RPF|1|A|A|967
9RPF|1|A|U|968
*
9RPF|1|A|A|1036
9RPF|1|A|A|1037
9RPF|1|A|C|1038
9RPF|1|A|A|1039
9RPF|1|A|U|1040
9RPF|1|A|A|1041
9RPF|1|A|U|1042

Current chains

Chain A: 12S mitochondrial rRNA

Nearby chains

Chain 2: Small ribosomal subunit protein mS37
Chain E: 28S ribosomal protein S6, mitochondrial
Chain J: 28S ribosomal protein S12, mitochondrial
Chain L: 28S ribosomal protein S15, mitochondrial
Chain N: 28S ribosomal protein S17, mitochondrial
Chain P: 28S ribosomal protein S18c, mitochondrial
Chain Q: Small ribosomal subunit protein bS21m
Chain T: 28S ribosomal protein S25, mitochondrial
Chain U: 28S ribosomal protein S26, mitochondrial

IL_9RPF_019