IL_9RPF_022

3D structure

PDB id

9RPF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and mS37 (State M4)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GAGU*ACUCC

Length

9 nucleotides

Bulged bases

9RPF|1|A|C|1001

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPF|1|A|G|986
9RPF|1|A|A|987
9RPF|1|A|G|988
9RPF|1|A|U|989
*
9RPF|1|A|A|998
9RPF|1|A|C|999
9RPF|1|A|U|1000
9RPF|1|A|C|1001
9RPF|1|A|C|1002

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain I

28S ribosomal protein S11, mitochondrial

Chain b

12S rRNA N4-methylcytidine (m4C) methyltransferase