3D structure

PDB id
9RPF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and mS37 (State M4)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.6 Å

Loop

Sequence
AUAUC*GCCCU
Length
10 nucleotides
Bulged bases
9RPF|1|A|A|1188
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RPF|1|A|A|1186
9RPF|1|A|U|1187
9RPF|1|A|A|1188
9RPF|1|A|U|1189
9RPF|1|A|C|1190
*
9RPF|1|A|G|1464
9RPF|1|A|C|1465
9RPF|1|A|C|1466
9RPF|1|A|C|1467
9RPF|1|A|U|1468

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 2
Small ribosomal subunit protein mS37
Chain F
28S ribosomal protein S7, mitochondrial
Chain G
28S ribosomal protein S9, mitochondrial

Coloring options:

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