IL_9RPV_019

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GAAC*GAGUUCAAGAGGGC

Length

18 nucleotides

Bulged bases

9RPV|1|L5|G|409, 9RPV|1|L5|G|413

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|G|387
9RPV|1|L5|A|388
9RPV|1|L5|A|389
9RPV|1|L5|C|390
*
9RPV|1|L5|G|401
9RPV|1|L5|A|402
9RPV|1|L5|G|403
9RPV|1|L5|U|404
9RPV|1|L5|U|405
9RPV|1|L5|C|406
9RPV|1|L5|A|407
9RPV|1|L5|A|408
9RPV|1|L5|G|409
9RPV|1|L5|A|410
9RPV|1|L5|G|411
9RPV|1|L5|G|412
9RPV|1|L5|G|413
9RPV|1|L5|C|414

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LP

60S ribosomal protein L17

Chain LY

60S ribosomal protein L26

Chain Ll

60S ribosomal protein L39