IL_9RPV_025

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGAUUCAAC*GCGCAUUUCC

Length

19 nucleotides

Bulged bases

9RPV|1|L5|C|685, 9RPV|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|G|464
9RPV|1|L5|G|465
9RPV|1|L5|A|466
9RPV|1|L5|U|467
9RPV|1|L5|U|468
9RPV|1|L5|C|469
9RPV|1|L5|A|470
9RPV|1|L5|A|471
9RPV|1|L5|C|472
*
9RPV|1|L5|G|682
9RPV|1|L5|C|683
9RPV|1|L5|G|684
9RPV|1|L5|C|685
9RPV|1|L5|A|686
9RPV|1|L5|U|687
9RPV|1|L5|U|688
9RPV|1|L5|U|689
9RPV|1|L5|C|690
9RPV|1|L5|C|691

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28