IL_9RPV_109

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

9RPV|1|L5|G|2903, 9RPV|1|L5|A|3596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|G|2901
9RPV|1|L5|G|2902
9RPV|1|L5|G|2903
9RPV|1|L5|U|2904
9RPV|1|L5|C|2905
*
9RPV|1|L5|G|3589
9RPV|1|L5|G|3590
9RPV|1|L5|C|3591
9RPV|1|L5|G|3592
9RPV|1|L5|C|3593
9RPV|1|L5|C|3594
9RPV|1|L5|U|3595
9RPV|1|L5|A|3596
9RPV|1|L5|G|3597
9RPV|1|L5|C|3598

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain LR

60S ribosomal protein L19