IL_9RPV_162

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

9RPV|1|L5|C|5013

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|G|5012
9RPV|1|L5|C|5013
9RPV|1|L5|A|5014
9RPV|1|L5|G|5015
9RPV|1|L5|A|5016
9RPV|1|L5|G|5017
*
9RPV|1|L5|C|5032
9RPV|1|L5|G|5033
9RPV|1|L5|A|5034
9RPV|1|L5|U|5035
9RPV|1|L5|C|5036

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LU

60S ribosomal protein L22

Chain LW

60S ribosomal protein L24

Chain SI

40S ribosomal protein S8