IL_9RPV_249
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 9RPV|1|M5|C|1935, 9RPV|1|M5|A|2041, 9RPV|1|M5|U|2044, 9RPV|1|M5|G|2045
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RPV|1|M5|G|1933
9RPV|1|M5|A|1934
9RPV|1|M5|C|1935
9RPV|1|M5|C|1936
9RPV|1|M5|C|1937
9RPV|1|M5|C|1938
9RPV|1|M5|A|1939
9RPV|1|M5|G|1940
9RPV|1|M5|A|1941
9RPV|1|M5|A|1942
9RPV|1|M5|A|1943
9RPV|1|M5|A|1944
*
9RPV|1|M5|U|2038
9RPV|1|M5|G|2039
9RPV|1|M5|A|2040
9RPV|1|M5|A|2041
9RPV|1|M5|A|2042
9RPV|1|M5|A|2043
9RPV|1|M5|U|2044
9RPV|1|M5|G|2045
9RPV|1|M5|G|2046
9RPV|1|M5|A|2047
9RPV|1|M5|U|2048
9RPV|1|M5|G|2049
9RPV|1|M5|G|2050
9RPV|1|M5|C|2051
9RPV|1|M5|G|2052
9RPV|1|M5|C|2053
Current chains
- Chain M5
- 28S rRNA of the stalled 80S
Nearby chains
- Chain M7
- 5S ribosomal RNA; 5S rRNA
- Chain MB
- Large ribosomal subunit protein uL3
- Chain MI
- 60S ribosomal protein L10
- Chain MO
- 60S ribosomal protein L13a
- Chain Mf
- 60S ribosomal protein L35a
- Chain Mm
- Ubiquitin-ribosomal protein eL40 fusion protein
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