IL_9RPV_255

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CCUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

9RPV|1|M5|U|2305

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|M5|C|2302
9RPV|1|M5|C|2303
9RPV|1|M5|U|2304
9RPV|1|M5|U|2305
9RPV|1|M5|G|2306
9RPV|1|M5|A|2307
9RPV|1|M5|A|2308
9RPV|1|M5|G|2309
*
9RPV|1|M5|U|2329
9RPV|1|M5|G|2330
9RPV|1|M5|G|2331
9RPV|1|M5|A|2332
9RPV|1|M5|G|2333

Current chains

Chain M5

28S rRNA of the stalled 80S

Nearby chains

Chain M8

5.8S ribosomal RNA; 5.8S rRNA

Chain MC

60S ribosomal protein L4

Chain MY

60S ribosomal protein L26

Chain Me

60S ribosomal protein L32