3D structure

PDB id
9RPV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ZAK-bound human disome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.35 Å

Loop

Sequence
CUG*CG
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RPV|1|M5|C|3708
9RPV|1|M5|U|3709
9RPV|1|M5|G|3710
*
9RPV|1|M5|C|3741
9RPV|1|M5|G|3742

Current chains

Chain M5
28S rRNA of the stalled 80S

Nearby chains

Chain E5
Transfer RNA; tRNA
Chain MA
Large ribosomal subunit protein uL2
Chain RB
40S ribosomal protein S3a
Chain S3
Small subunit ribosomal RNA; SSU rRNA

Coloring options:

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