IL_9RPV_310
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 9RPV|1|M5|A|4548
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_310 not in the Motif Atlas
- Homologous match to IL_8GLP_154
- Geometric discrepancy: 0.0975
- The information below is about IL_8GLP_154
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 188
Unit IDs
9RPV|1|M5|C|4537
9RPV|1|M5|G|4538
*
9RPV|1|M5|C|4547
9RPV|1|M5|A|4548
9RPV|1|M5|G|4549
Current chains
- Chain M5
- 28S rRNA of the stalled 80S
Nearby chains
- Chain B5
- Transfer RNA; tRNA
- Chain MA
- Large ribosomal subunit protein uL2
Coloring options: