IL_9RPV_319

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GAUUAU*AGAAUC

Length

12 nucleotides

Bulged bases

9RPV|1|M5|A|4708

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|M5|G|4680
9RPV|1|M5|A|4681
9RPV|1|M5|U|4682
9RPV|1|M5|U|4683
9RPV|1|M5|A|4684
9RPV|1|M5|U|4685
*
9RPV|1|M5|A|4705
9RPV|1|M5|G|4706
9RPV|1|M5|A|4707
9RPV|1|M5|A|4708
9RPV|1|M5|U|4709
9RPV|1|M5|C|4710

Current chains

Chain M5

28S rRNA of the stalled 80S

Nearby chains

Chain MH

60S ribosomal protein L9

Chain MO

60S ribosomal protein L13a

Chain Mm

Ubiquitin-ribosomal protein eL40 fusion protein