IL_9RPV_333
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- AGAG*CGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_333 not in the Motif Atlas
- Homologous match to IL_8GLP_179
- Geometric discrepancy: 0.0608
- The information below is about IL_8GLP_179
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9RPV|1|M5|A|5014
9RPV|1|M5|G|5015
9RPV|1|M5|A|5016
9RPV|1|M5|G|5017
*
9RPV|1|M5|C|5032
9RPV|1|M5|G|5033
9RPV|1|M5|A|5034
9RPV|1|M5|U|5035
Current chains
- Chain M5
- 28S rRNA of the stalled 80S
Nearby chains
- Chain MR
- 60S ribosomal protein L19
- Chain RI
- 40S ribosomal protein S8
Coloring options: