3D structure

PDB id
9RPV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ZAK-bound human disome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.35 Å

Loop

Sequence
GAAAAAAUU*ACCGCAGC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RPV|1|S2|G|807
9RPV|1|S2|A|808
9RPV|1|S2|A|809
9RPV|1|S2|A|810
9RPV|1|S2|A|811
9RPV|1|S2|A|812
9RPV|1|S2|A|813
9RPV|1|S2|U|814
9RPV|1|S2|U|815
*
9RPV|1|S2|A|849
9RPV|1|S2|C|850
9RPV|1|S2|C|851
9RPV|1|S2|G|852
9RPV|1|S2|C|853
9RPV|1|S2|A|854
9RPV|1|S2|G|855
9RPV|1|S2|C|856

Current chains

Chain S2
18S rRNA of the collided 80S

Nearby chains

Chain SE
Small ribosomal subunit protein eS4, X isoform
Chain SJ
40S ribosomal protein S9
Chain SL
40S ribosomal protein S11
Chain SW
40S ribosomal protein S15a

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1334 s