IL_9RPV_387
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GCC*GC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_387 not in the Motif Atlas
- Geometric match to IL_9AXU_066
- Geometric discrepancy: 0.2273
- The information below is about IL_9AXU_066
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_15011.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 59
Unit IDs
9RPV|1|S2|G|832
9RPV|1|S2|C|833
9RPV|1|S2|C|834
*
9RPV|1|S2|G|841
9RPV|1|S2|C|842
Current chains
- Chain S2
- 18S rRNA of the collided 80S
Nearby chains
- Chain M5
- Large subunit ribosomal RNA; LSU rRNA
- Chain MG
- 60S ribosomal protein L7a
- Chain SE
- Small ribosomal subunit protein eS4, X isoform
- Chain SY
- 40S ribosomal protein S24
Coloring options: