3D structure

PDB id
9RPV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ZAK-bound human disome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.35 Å

Loop

Sequence
CG*CAG
Length
5 nucleotides
Bulged bases
9RPV|1|S2|A|1489
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RPV|1|S2|C|1337
9RPV|1|S2|G|1338
*
9RPV|1|S2|C|1488
9RPV|1|S2|A|1489
9RPV|1|S2|G|1490

Current chains

Chain S2
18S rRNA of the collided 80S

Nearby chains

Chain A4
mRNA of the collided 80S
Chain D4
Transfer RNA; tRNA
Chain SC
40S ribosomal protein S2
Chain SD
40S ribosomal protein S3
Chain SQ
40S ribosomal protein S16
Chain SU
40S ribosomal protein S20
Chain Sd
40S ribosomal protein S29

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