IL_9RPV_425

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S2|G|1604
9RPV|1|S2|G|1605
9RPV|1|S2|G|1606
9RPV|1|S2|A|1607
9RPV|1|S2|U|1608
9RPV|1|S2|C|1609
9RPV|1|S2|G|1610
*
9RPV|1|S2|C|1629
9RPV|1|S2|A|1630
9RPV|1|S2|U|1631
9RPV|1|S2|G|1632
9RPV|1|S2|A|1633
9RPV|1|S2|A|1634
9RPV|1|S2|C|1635

Current chains

Chain S2

18S rRNA of the collided 80S

Nearby chains

Chain SF

40S ribosomal protein S5

Chain SS

40S ribosomal protein S18

Chain ST

40S ribosomal protein S19