IL_9RPV_445
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 9RPV|1|S3|C|65, 9RPV|1|S3|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_445 not in the Motif Atlas
- Homologous match to IL_9H3G_161
- Geometric discrepancy: 0.1998
- The information below is about IL_9H3G_161
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.4
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9RPV|1|S3|U|63
9RPV|1|S3|A|64
9RPV|1|S3|C|65
9RPV|1|S3|G|66
9RPV|1|S3|C|67
9RPV|1|S3|A|68
*
9RPV|1|S3|U|81
9RPV|1|S3|G|82
9RPV|1|S3|A|83
9RPV|1|S3|A|84
9RPV|1|S3|A|85
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain MW
- 60S ribosomal protein L24
- Chain RG
- 40S ribosomal protein S6
- Chain RY
- 40S ribosomal protein S24
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