IL_9RPV_454

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CA(PSU)U*ACCUCGGG

Length

12 nucleotides

Bulged bases

9RPV|1|S3|U|305, 9RPV|1|S3|G|307

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|C|216
9RPV|1|S3|A|217
9RPV|1|S3|PSU|218
9RPV|1|S3|U|219
*
9RPV|1|S3|A|302
9RPV|1|S3|C|303
9RPV|1|S3|C|304
9RPV|1|S3|U|305
9RPV|1|S3|C|306
9RPV|1|S3|G|307
9RPV|1|S3|G|308
9RPV|1|S3|G|309

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain RE

Small ribosomal subunit protein eS4, X isoform

Chain RI

40S ribosomal protein S8