IL_9RPV_460

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGG*CGAU(OMU)C

Length

9 nucleotides

Bulged bases

9RPV|1|S3|OMU|428

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|G|411
9RPV|1|S3|G|412
9RPV|1|S3|G|413
*
9RPV|1|S3|C|424
9RPV|1|S3|G|425
9RPV|1|S3|A|426
9RPV|1|S3|U|427
9RPV|1|S3|OMU|428
9RPV|1|S3|C|429

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain RE

Small ribosomal subunit protein eS4, X isoform

Chain RJ

40S ribosomal protein S9

Chain RX

40S ribosomal protein S23