IL_9RPV_484
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GGCC*GAAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_484 not in the Motif Atlas
- Homologous match to IL_9H3G_199
- Geometric discrepancy: 0.082
- The information below is about IL_9H3G_199
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 42
Unit IDs
9RPV|1|S3|G|928
9RPV|1|S3|G|929
9RPV|1|S3|C|930
9RPV|1|S3|C|931
*
9RPV|1|S3|G|1010
9RPV|1|S3|A|1011
9RPV|1|S3|A|1012
9RPV|1|S3|U|1013
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain Mc
- 60S ribosomal protein L30
- Chain RB
- 40S ribosomal protein S3a
- Chain RN
- 40S ribosomal protein S13
- Chain Rb
- 40S ribosomal protein S27
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