IL_9RPV_512

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

UA*UCCCCCA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|S3|U|1408
9RPV|1|S3|A|1409
*
9RPV|1|S3|U|1432
9RPV|1|S3|C|1433
9RPV|1|S3|C|1434
9RPV|1|S3|C|1435
9RPV|1|S3|C|1436
9RPV|1|S3|C|1437
9RPV|1|S3|A|1438

Current chains

Chain S3

18S rRNA of the stalled 80S

Nearby chains

Chain RQ

40S ribosomal protein S16

Chain RU

40S ribosomal protein S20