IL_9RPV_530
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RPV_530 not in the Motif Atlas
- Homologous match to IL_9PN5_231
- Geometric discrepancy: 0.0885
- The information below is about IL_9PN5_231
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.5
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
9RPV|1|S3|C|1742
9RPV|1|S3|G|1743
9RPV|1|S3|G|1744
9RPV|1|S3|A|1745
9RPV|1|S3|U|1746
*
9RPV|1|S3|A|1788
9RPV|1|S3|G|1789
9RPV|1|S3|A|1790
9RPV|1|S3|A|1791
9RPV|1|S3|G|1792
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain MW
- 60S ribosomal protein L24
- Chain RG
- 40S ribosomal protein S6
- Chain RI
- 40S ribosomal protein S8
Coloring options: