IL_9RTU_019

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RTU_019 not in the Motif Atlas

Geometric match to IL_8GLP_059

Geometric discrepancy: 0.1071

The information below is about IL_8GLP_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15190.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

24

Unit IDs

9RTU|1|A|U|703
9RTU|1|A|G|704
9RTU|1|A|A|705
9RTU|1|A|A|706
9RTU|1|A|G|707
*
9RTU|1|A|U|724
9RTU|1|A|G|725
9RTU|1|A|G|726
9RTU|1|A|A|727
9RTU|1|A|G|728

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2