IL_9RTU_047

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RTU_047 not in the Motif Atlas

Geometric match to IL_8B0X_111

Geometric discrepancy: 0.0831

The information below is about IL_8B0X_111

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89021.3

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

7

Unit IDs

9RTU|1|A|C|1351
9RTU|1|A|U|1352
9RTU|1|A|A|1353
9RTU|1|A|A|1354
9RTU|1|A|G|1355
*
9RTU|1|A|C|1376
9RTU|1|A|G|1377
9RTU|1|A|A|1378
9RTU|1|A|U|1379
9RTU|1|A|G|1380

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34

Chain C

50S ribosomal protein L2