IL_9RTU_062

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAACUAGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RTU_062 not in the Motif Atlas

Geometric match to IL_8B0X_180

Geometric discrepancy: 0.072

The information below is about IL_8B0X_180

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80252.1

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

10

Unit IDs

9RTU|1|A|G|1666
9RTU|1|A|G|1667
9RTU|1|A|A|1668
9RTU|1|A|A|1669
9RTU|1|A|C|1670
9RTU|1|A|U|1671
9RTU|1|A|A|1672
9RTU|1|A|G|1673
9RTU|1|A|G|1674
*
9RTU|1|A|C|1990
9RTU|1|A|U|1991
9RTU|1|A|G|1992
9RTU|1|A|U|1993
9RTU|1|A|C|1994

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14