3D structure

PDB id
9RTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GCCUUGAUGUGUAGGAUAG*CCUUUAAUGUU
Length
30 nucleotides
Bulged bases
9RTU|1|A|U|2111, 9RTU|1|A|G|2116, 9RTU|1|A|U|2118
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RTU|1|A|G|2102
9RTU|1|A|C|2103
9RTU|1|A|C|2104
9RTU|1|A|U|2105
9RTU|1|A|U|2106
9RTU|1|A|G|2107
9RTU|1|A|A|2108
9RTU|1|A|U|2109
9RTU|1|A|G|2110
9RTU|1|A|U|2111
9RTU|1|A|G|2112
9RTU|1|A|U|2113
9RTU|1|A|A|2114
9RTU|1|A|G|2115
9RTU|1|A|G|2116
9RTU|1|A|A|2117
9RTU|1|A|U|2118
9RTU|1|A|A|2119
9RTU|1|A|G|2120
*
9RTU|1|A|C|2178
9RTU|1|A|C|2179
9RTU|1|A|U|2180
9RTU|1|A|U|2181
9RTU|1|A|U|2182
9RTU|1|A|A|2183
9RTU|1|A|A|2184
9RTU|1|A|U|2185
9RTU|1|A|G|2186
9RTU|1|A|U|2187
9RTU|1|A|U|2188

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain g
30S ribosomal protein S7
Chain v
Transfer RNA; tRNA

Coloring options:

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