IL_9RTU_130

3D structure

PDB id

9RTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACAAU*AU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RTU_130 not in the Motif Atlas

Geometric match to IL_8B0X_017

Geometric discrepancy: 0.1817

The information below is about IL_8B0X_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_26900.1

Basepair signature

cWW-cSH-cWS-tWH-cWW

Number of instances in this motif group

5

Unit IDs

9RTU|1|a|A|371
9RTU|1|a|C|372
9RTU|1|a|A|373
9RTU|1|a|A|374
9RTU|1|a|U|375
*
9RTU|1|a|A|389
9RTU|1|a|U|390

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain x

Elongation factor G