3D structure

PDB id
9RTV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
UGAUGUGUAGGAUAGG*CCCUUUA
Length
23 nucleotides
Bulged bases
9RTV|1|A|U|2111, 9RTV|1|A|G|2115, 9RTV|1|A|G|2116, 9RTV|1|A|U|2118
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RTV|1|A|U|2106
9RTV|1|A|G|2107
9RTV|1|A|A|2108
9RTV|1|A|U|2109
9RTV|1|A|G|2110
9RTV|1|A|U|2111
9RTV|1|A|G|2112
9RTV|1|A|U|2113
9RTV|1|A|A|2114
9RTV|1|A|G|2115
9RTV|1|A|G|2116
9RTV|1|A|A|2117
9RTV|1|A|U|2118
9RTV|1|A|A|2119
9RTV|1|A|G|2120
9RTV|1|A|G|2121
*
9RTV|1|A|C|2177
9RTV|1|A|C|2178
9RTV|1|A|C|2179
9RTV|1|A|U|2180
9RTV|1|A|U|2181
9RTV|1|A|U|2182
9RTV|1|A|A|2183

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain g
30S ribosomal protein S7
Chain v
Transfer RNA; tRNA

Coloring options:

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