IL_9RTV_085

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAGGC*GCCGACCUUGAAAUAC

Length

22 nucleotides

Bulged bases

9RTV|1|A|G|2125, 9RTV|1|A|A|2126, 9RTV|1|A|A|2170, 9RTV|1|A|A|2171, 9RTV|1|A|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RTV|1|A|G|2124
9RTV|1|A|G|2125
9RTV|1|A|A|2126
9RTV|1|A|G|2127
9RTV|1|A|G|2128
9RTV|1|A|C|2129
*
9RTV|1|A|G|2159
9RTV|1|A|C|2160
9RTV|1|A|C|2161
9RTV|1|A|G|2162
9RTV|1|A|A|2163
9RTV|1|A|C|2164
9RTV|1|A|C|2165
9RTV|1|A|U|2166
9RTV|1|A|U|2167
9RTV|1|A|G|2168
9RTV|1|A|A|2169
9RTV|1|A|A|2170
9RTV|1|A|A|2171
9RTV|1|A|U|2172
9RTV|1|A|A|2173
9RTV|1|A|C|2174

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain v

Transfer RNA; tRNA