IL_9RTV_088

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

9RTV|1|A|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RTV_088 not in the Motif Atlas

Geometric match to IL_8B0X_149

Geometric discrepancy: 0.2096

The information below is about IL_8B0X_149

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

9RTV|1|A|U|2401
9RTV|1|A|U|2402
9RTV|1|A|C|2403
*
9RTV|1|A|G|2414
9RTV|1|A|G|2415

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL33

Chain 3

50S ribosomal protein L35

Chain L

50S ribosomal protein L15