IL_9RTV_160

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAGUU*AAUGUGCCUUCGGGAAC

Length

23 nucleotides

Bulged bases

9RTV|1|a|U|1025, 9RTV|1|a|C|1027, 9RTV|1|a|U|1029, 9RTV|1|a|U|1030, 9RTV|1|a|C|1031

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RTV|1|a|G|1003
9RTV|1|a|A|1004
9RTV|1|a|A|1005
9RTV|1|a|G|1006
9RTV|1|a|U|1007
9RTV|1|a|U|1008
*
9RTV|1|a|A|1021
9RTV|1|a|A|1022
9RTV|1|a|U|1023
9RTV|1|a|G|1024
9RTV|1|a|U|1025
9RTV|1|a|G|1026
9RTV|1|a|C|1027
9RTV|1|a|C|1028
9RTV|1|a|U|1029
9RTV|1|a|U|1030
9RTV|1|a|C|1031
9RTV|1|a|G|1032
9RTV|1|a|G|1033
9RTV|1|a|G|1034
9RTV|1|a|A|1035
9RTV|1|a|A|1036
9RTV|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14