IL_9RU6_013
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- GAG*CUACC
- Length
- 8 nucleotides
- Bulged bases
- 9RU6|1|A|A|1986, 9RU6|1|A|U|1998, 9RU6|1|A|A|1999, 9RU6|1|A|C|2000
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RU6_013 not in the Motif Atlas
- Geometric match to IL_7A0S_021
- Geometric discrepancy: 0.0762
- The information below is about IL_7A0S_021
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.3
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
9RU6|1|A|G|1985
9RU6|1|A|A|1986
9RU6|1|A|G|1987
*
9RU6|1|A|C|1997
9RU6|1|A|U|1998
9RU6|1|A|A|1999
9RU6|1|A|C|2000
9RU6|1|A|C|2001
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
Coloring options: