IL_9RU6_078
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- ACC*GUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RU6_078 not in the Motif Atlas
- Geometric match to IL_9AXU_044
- Geometric discrepancy: 0.1113
- The information below is about IL_9AXU_044
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 241
Unit IDs
9RU6|1|AA|A|982
9RU6|1|AA|C|983
9RU6|1|AA|C|984
*
9RU6|1|AA|G|1004
9RU6|1|AA|U|1005
9RU6|1|AA|U|1006
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AI
- Small ribosomal subunit protein uS11m
- Chain AQ
- MRPS21 isoform 1
Coloring options: