IL_9RU6_104

3D structure

PDB id

9RU6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

UC*GCA

Length

5 nucleotides

Bulged bases

9RU6|1|AA|C|1539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RU6_104 not in the Motif Atlas

Geometric match to IL_8GLP_083

Geometric discrepancy: 0.3858

The information below is about IL_8GLP_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05642.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

67

Unit IDs

9RU6|1|AA|U|1510
9RU6|1|AA|C|1511
*
9RU6|1|AA|G|1538
9RU6|1|AA|C|1539
9RU6|1|AA|A|1540

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain A3

Aurora kinase A-interacting protein

Chain L

39S ribosomal protein L14, mitochondrial