IL_9RU8_079

3D structure

PDB id

9RU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

9RU8|1|L5|U|2305

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU8|1|L5|C|2302
9RU8|1|L5|C|2303
9RU8|1|L5|U|2304
9RU8|1|L5|U|2305
9RU8|1|L5|G|2306
9RU8|1|L5|A|2307
9RU8|1|L5|A|2308
9RU8|1|L5|G|2309
*
9RU8|1|L5|U|2329
9RU8|1|L5|G|2330
9RU8|1|L5|G|2331
9RU8|1|L5|A|2332
9RU8|1|L5|G|2333

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LC

60S ribosomal protein L4

Chain LY

Large ribosomal subunit protein uL24

Chain Le

60S ribosomal protein L32