IL_9RU8_084

3D structure

PDB id

9RU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGAG*CGAAAG

Length

11 nucleotides

Bulged bases

9RU8|1|L5|A|2512, 9RU8|1|L5|A|2513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU8|1|L5|C|2446
9RU8|1|L5|U|2447
9RU8|1|L5|G|2448
9RU8|1|L5|A|2449
9RU8|1|L5|G|2450
*
9RU8|1|L5|C|2509
9RU8|1|L5|G|2510
9RU8|1|L5|A|2511
9RU8|1|L5|A|2512
9RU8|1|L5|A|2513
9RU8|1|L5|G|2514

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LA

Large ribosomal subunit protein uL2

Chain Lg

Large ribosomal subunit protein eL34

Chain Lj

Large ribosomal subunit protein eL37

Chain Ll

Large ribosomal subunit protein eL39