IL_9RU9_078

3D structure

PDB id

9RU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

9RU9|1|L5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU9|1|L5|U|1957
9RU9|1|L5|A|1958
9RU9|1|L5|U|1959
9RU9|1|L5|A|1960
9RU9|1|L5|G|1961
9RU9|1|L5|A|1962
9RU9|1|L5|C|1963
9RU9|1|L5|A|1964
9RU9|1|L5|G|1965
*
9RU9|1|L5|C|2022
9RU9|1|L5|C|2023
9RU9|1|L5|G|2024
9RU9|1|L5|A|2025
9RU9|1|L5|A|2026

Current chains

Chain L5

23S rRNA

Nearby chains

Chain LS

60S ribosomal protein L18a

Chain Lm

Ubiquitin-ribosomal protein eL40 fusion protein