IL_9RU9_148

3D structure

PDB id

9RU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GAUUAU*AGAAUC

Length

12 nucleotides

Bulged bases

9RU9|1|L5|A|4708

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU9|1|L5|G|4680
9RU9|1|L5|A|4681
9RU9|1|L5|U|4682
9RU9|1|L5|U|4683
9RU9|1|L5|A|4684
9RU9|1|L5|U|4685
*
9RU9|1|L5|A|4705
9RU9|1|L5|G|4706
9RU9|1|L5|A|4707
9RU9|1|L5|A|4708
9RU9|1|L5|U|4709
9RU9|1|L5|C|4710

Current chains

Chain L5

23S rRNA

Nearby chains

Chain LH

60S ribosomal protein L9

Chain LO

60S ribosomal protein L13a

Chain Lm

Ubiquitin-ribosomal protein eL40 fusion protein