3D structure

PDB id
9RU9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
GGGAUCG*CAUGAAC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RU9|1|S2|G|1604
9RU9|1|S2|G|1605
9RU9|1|S2|G|1606
9RU9|1|S2|A|1607
9RU9|1|S2|U|1608
9RU9|1|S2|C|1609
9RU9|1|S2|G|1610
*
9RU9|1|S2|C|1629
9RU9|1|S2|A|1630
9RU9|1|S2|U|1631
9RU9|1|S2|G|1632
9RU9|1|S2|A|1633
9RU9|1|S2|A|1634
9RU9|1|S2|C|1635

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SF
40S ribosomal protein S5
Chain SS
40S ribosomal protein S18
Chain ST
40S ribosomal protein S19
Chain SZ
40S ribosomal protein S25

Coloring options:

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